Source code for TransportMaps.CLI.ScriptBase

#
# This file is part of TransportMaps.
#
# TransportMaps is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# TransportMaps is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with TransportMaps.  If not, see <http://www.gnu.org/licenses/>.
#
# Transport Maps Library
# Copyright (C) 2015-2018 Massachusetts Institute of Technology
# Uncertainty Quantification group
# Department of Aeronautics and Astronautics
#
# Author: Transport Map Team
# Website: transportmaps.mit.edu
# Support: transportmaps.mit.edu/qa/
#

import sys
import getopt
import os
import os.path
import shutil
import time
import datetime
import pickle

from TransportMaps import DataStorageObject
from TransportMaps.ObjectBase import TMO

__all__ = ['Script']


[docs]class Script(TMO):
[docs] def tstamp_print(self, msg, *args, **kwargs): tstamp = datetime.datetime.fromtimestamp( time.time() ).strftime('%Y-%m-%d %H:%M:%S') print(tstamp + " " + msg, *args, **kwargs)
[docs] def filter_tstamp_print(self, msg, *args, **kwargs): if self.VERBOSE: self.tstamp_print(msg, *args, **kwargs)
[docs] def filter_print(self, *args, **kwargs): if self.VERBOSE: print(*args, **kwargs)
[docs] def safe_store(self, data, fname): # Backup copy file_exists = os.path.exists(fname) if file_exists: shutil.copyfile(fname, str(fname) + '.bak') # Store data with open(fname, 'wb') as out_stream: pickle.dump(data, out_stream); # Remove backup if file_exists: os.remove(str(fname) + '.bak')
[docs] def _load_opts(self, **kwargs): self.VERBOSE = kwargs['verbose'] self.INTERACTIVE = kwargs['interactive'] self.INPUT = kwargs['input'] self.OUTPUT = kwargs['output'] self.LOGGING_LEVEL = kwargs['log'] self.NPROCS = kwargs['nprocs']
def __init__(self, **kwargs): super(Script, self).__init__() self.stg = DataStorageObject() self._load_opts(**kwargs) self._check_required_args()
[docs] def _check_required_args(self): # Check for required arguments if None in [self.INPUT, self.OUTPUT]: self.usage() self.tstamp_print("ERROR: Option --input and --output must be specified") sys.exit(3)
[docs] def load(self): raise NotImplementedError("To be implemented in sub-classes")
[docs] def run(self, mpi_pool): raise NotImplementedError("To be implemented in sub-classes")